Task 532556

Name boinc2docker_70042_1602700216.401724_1
Workunit 244287
Created 14 Oct 2020, 18:30:18 UTC
Sent 14 Oct 2020, 18:32:27 UTC
Report deadline 21 Oct 2020, 18:32:27 UTC
Received 14 Oct 2020, 19:43:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 5174
Run time 1 min 36 sec
CPU time 43 sec
Validate state Valid
Credit 3.44
Device peak FLOPS 14.52 GFLOPS
Application version boinc2docker v1.07 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 101.15 MB
Peak swap size 4,580.92 MB
Peak disk usage 377.94 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
2020-10-14 14:42:00 (191331): vboxwrapper (7.7.26197): starting
2020-10-14 14:42:01 (191331): Feature: Checkpoint interval offset (374 seconds)
2020-10-14 14:42:01 (191331): Detected: VirtualBox VboxManage Interface (Version: 6.1.10)
2020-10-14 14:42:01 (191331): Detected: Minimum checkpoint interval (600.000000 seconds)
2020-10-14 14:42:02 (191331): Create VM. (boinc_fea8e3cd40a1a93a, slot#2)
2020-10-14 14:42:02 (191331): Updating drive controller type and model for desired configuration.
2020-10-14 14:42:02 (191331): Setting Memory Size for VM. (4011MB)
2020-10-14 14:42:03 (191331): Setting CPU Count for VM. (4)
2020-10-14 14:42:03 (191331): Setting Chipset Options for VM.
2020-10-14 14:42:03 (191331): Setting Boot Options for VM.
2020-10-14 14:42:03 (191331): Setting Network Configuration for NAT.
2020-10-14 14:42:04 (191331): Enabling VM Network Access.
2020-10-14 14:42:04 (191331): Disabling USB Support for VM.
2020-10-14 14:42:04 (191331): Disabling COM Port Support for VM.
2020-10-14 14:42:05 (191331): Disabling LPT Port Support for VM.
2020-10-14 14:42:05 (191331): Disabling Audio Support for VM.
2020-10-14 14:42:06 (191331): Disabling Clipboard Support for VM.
2020-10-14 14:42:06 (191331): Disabling Drag and Drop Support for VM.
2020-10-14 14:42:07 (191331): Adding storage controller(s) to VM.
2020-10-14 14:42:07 (191331): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2020-10-14 14:42:07 (191331): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2020-10-14 14:42:08 (191331): Enabling shared directory for VM.
2020-10-14 14:42:08 (191331): Starting VM. (boinc_fea8e3cd40a1a93a, slot#2)
2020-10-14 14:42:12 (191331): Successfully started VM. (PID = '191850')
2020-10-14 14:42:12 (191331): Reporting VM Process ID to BOINC.
2020-10-14 14:42:14 (191331): Guest Log: BIOS: VirtualBox 6.1.9
2020-10-14 14:42:14 (191331): Guest Log: CPUID EDX: 0x178bfbff
2020-10-14 14:42:14 (191331): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2020-10-14 14:42:14 (191331): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2020-10-14 14:42:14 (191331): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2020-10-14 14:42:14 (191331): Guest Log: BIOS: Boot from Hard Disk 0 failed
2020-10-14 14:42:14 (191331): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2020-10-14 14:42:14 (191331): Guest Log: BIOS: Booting from CD-ROM...
2020-10-14 14:42:16 (191331): VM state change detected. (old = 'poweroff', new = 'running')
2020-10-14 14:42:16 (191331): Preference change detected
2020-10-14 14:42:16 (191331): Setting CPU throttle for VM. (100%)
2020-10-14 14:42:17 (191331): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2020-10-14 14:42:20 (191331): Guest Log: BIOS: KBD: unsupported int 16h function 03
2020-10-14 14:42:20 (191331): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2020-10-14 14:42:32 (191331): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2020-10-14 14:42:32 (191331): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2020-10-14 14:42:32 (191331): Guest Log: net.ipv4.ip_forward = 1
2020-10-14 14:42:32 (191331): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2020-10-14 14:42:32 (191331): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2020-10-14 14:42:32 (191331): Guest Log: sysctl: "cannot stat %s" is an unknown key
2020-10-14 14:42:32 (191331): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2020-10-14 14:42:32 (191331): Guest Log: Segmentation fault
2020-10-14 14:42:32 (191331): Guest Log: automount ...
2020-10-14 14:42:32 (191331): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2020-10-14 14:42:33 (191331): Guest Log: automount over.
2020-10-14 14:42:33 (191331): Guest Log: Setting hostname to boot2docker Done.
2020-10-14 14:42:33 (191331): Guest Log: Wed Oct 14 14:42:30 UTC 2020 dhcp -------------------------------
2020-10-14 14:42:38 (191331): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2020-10-14 14:42:38 (191331): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1369)
2020-10-14 14:42:40 (191331): Guest Log: Wed Oct 14 14:42:37 UTC 2020 dhcp -------------------------------
2020-10-14 14:42:40 (191331): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.000090 main     Log opened 2020-10-14T14:42:37.700290000Z
2020-10-14 14:42:40 (191331): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.000090 main     Log opened 2020-10-14T14:42:37.700290000Z
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.001936 main     OS Product: Linux
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.001936 main     OS Product: Linux
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.002514 main     OS Release: 4.1.19-boot2docker
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.002514 main     OS Release: 4.1.19-boot2docker
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.003175 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.003175 main     OS Version: #1 SMP Sun00:00:00.015502 main     Executable: /sbin/VBoxService
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.015504 main     Process ID: 862
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.015505 main     Package type: LINUX_64BITS_GENERIC
2020-10-14 14:42:40 (191331): Guest Log:  Apr 17 19:40:54 UTC 2016
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.015502 main     Executable: /sbin/VBoxService
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.015504 main     Process ID: 862
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.015505 main     Package type: LINUX_64BITS_GENERIC
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.103720 main     5.0.16 r105871 started. Verbose level = 0
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.103720 main     5.0.16 r105871 started. Verbose level = 0
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.175578 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2020-10-14 14:42:40 (191331): Guest Log: 00:00:00.175631 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2020-10-14 14:42:40 (191331): Guest Log: Mounting BOINC shared/...
2020-10-14 14:42:42 (191331): Guest Log: -------------------
2020-10-14 14:42:42 (191331): Guest Log: Wed Oct 14 18:42:41 UTC 2020
2020-10-14 14:42:45 (191331): Guest Log: 00:00:05.179737 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2020-10-14 14:42:49 (191331): Guest Log: Wed Oct 14 18:42:46 UTC 2020
2020-10-14 14:42:49 (191331): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2020-10-14 14:42:49 (191331): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2020-10-14 14:42:49 (191331): Guest Log:     inet 127.0.0.1/8 scope host lo
2020-10-14 14:42:49 (191331): Guest Log:        valid_lft forever preferred_lft forever
2020-10-14 14:42:49 (191331): Guest Log:     inet6 ::1/128 scope host 
2020-10-14 14:42:49 (191331): Guest Log:        valid_lft forever preferred_lft forever
2020-10-14 14:42:49 (191331): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2020-10-14 14:42:49 (191331): Guest Log:     link/ether d2:22:af:61:8a:90 brd ff:ff:ff:ff:ff:ff
2020-10-14 14:42:49 (191331): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2020-10-14 14:42:49 (191331): Guest Log:     link/ether 08:00:27:c3:b7:7f brd ff:ff:ff:ff:ff:ff
2020-10-14 14:42:49 (191331): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2020-10-14 14:42:49 (191331): Guest Log:        valid_lft forever preferred_lft forever
2020-10-14 14:42:49 (191331): Guest Log:     inet6 fe80::a00:27ff:fec3:b77f/64 scope link 
2020-10-14 14:42:49 (191331): Guest Log:        valid_lft forever preferred_lft forever
2020-10-14 14:42:49 (191331): Guest Log: -------------------
2020-10-14 14:42:49 (191331): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2020-10-14 14:42:49 (191331): Guest Log: Waiting for Docker daemon to start...
2020-10-14 14:42:50 (191331): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2020-10-14 14:42:50 (191331): Guest Log: Running boinc_app...
2020-10-14 14:42:50 (191331): Guest Log: Importing Docker image from BOINC...
2020-10-14 14:42:50 (191331): Guest Log: 00:00:10.180540 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2020-10-14 14:43:27 (191331): Guest Log: Prerun diagnostics...
2020-10-14 14:43:27 (191331): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE
2020-10-14 14:43:27 (191331): Guest Log: carlosred/opensees   latest              edb0f99ae455        6 months ago        877.9 MB
2020-10-14 14:43:27 (191331): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2020-10-14 14:43:27 (191331): Guest Log: 906.3M	/var/lib/docker
2020-10-14 14:43:27 (191331): Guest Log:               total        used        free      shared  buff/cache   available
2020-10-14 14:43:27 (191331): Guest Log: Mem:           3865          64        2664        1070        1136        2671
2020-10-14 14:43:27 (191331): Guest Log: Swap:           915           0         915
2020-10-14 14:43:27 (191331): Guest Log: Prerun commands...
2020-10-14 14:43:27 (191331): Guest Log: Running... 
2020-10-14 14:43:27 (191331): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
2020-10-14 14:43:27 (191331): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed
2020-10-14 14:43:28 (191331): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
2020-10-14 14:43:28 (191331): Guest Log: 100  3582  100  3582    0     0   9720      0 --:--:-- --:--:-- --:--:--  9733
2020-10-14 14:43:28 (191331): Guest Log: 	 OpenSees -- Open System For Earthquake Engineering Simulation
2020-10-14 14:43:28 (191331): Guest Log: 	Pacific Earthquake Engineering Research Center -- 2.4.5 (rev 5855)
2020-10-14 14:43:28 (191331): Guest Log: 	    (c) Copyright 1999-2013 The Regents of the University of California
2020-10-14 14:43:28 (191331): Guest Log: 				 All Rights Reserved
2020-10-14 14:43:28 (191331): Guest Log:     (Copyright and Disclaimer @ http://www.berkeley.edu/OpenSees/copyright.html)
2020-10-14 14:43:28 (191331): Guest Log: Estimated yield curvature: 0.000126984126984127
2020-10-14 14:43:28 (191331): Guest Log: 	 OpenSees -- Open System For Earthquake Engineering Simulation
2020-10-14 14:43:28 (191331): Guest Log: 	Pacific Earthquake Engineering Research Center -- 2.4.5 (rev 5855)
2020-10-14 14:43:28 (191331): Guest Log: 	    (c) Copyright 1999-2013 The Regents of the University of California
2020-10-14 14:43:28 (191331): Guest Log: 				 All Rights Reserved
2020-10-14 14:43:28 (191331): Guest Log:     (Copyright and Disclaimer @ http://www.berkeley.edu/OpenSees/copyright.html)
2020-10-14 14:43:28 (191331): Guest Log: Eqilibrium Check After Gravity:
2020-10-14 14:43:28 (191331): Guest Log: SumX: Inputed: 0.0 + Computed: 0.0 = 0.0
2020-10-14 14:43:28 (191331): Guest Log: Eqilibrium Check After Lateral Loads:
2020-10-14 14:43:28 (191331): Guest Log: SumX: Inputed: 490.0 + Computed: -490.0 = 0.0
2020-10-14 14:43:28 (191331): Guest Log: SumY: Inputed: -3340.0 + Computed: 3340.0000000000005 = 4.547473508864641e-13
2020-10-14 14:43:28 (191331): Guest Log: ElasticBeam2d: 1
2020-10-14 14:43:28 (191331): Guest Log: 	Connected Nodes: 1 5 
2020-10-14 14:43:28 (191331): Guest Log: 	CoordTransf: 2
2020-10-14 14:43:28 (191331): Guest Log: 	mass density:  0, cMass: 0
2020-10-14 14:43:28 (191331): Guest Log: 	End 1 Forces (P V M): 401.845 65.7665 8971.03
2020-10-14 14:43:28 (191331): Guest Log: 	End 2 Forces (P V M): -401.845 -65.7665 1683.13
2020-10-14 14:43:28 (191331): Guest Log: ElasticBeam2d: 4
2020-10-14 14:43:28 (191331): Guest Log: 	Connected Nodes: 2 6 
2020-10-14 14:43:28 (191331): Guest Log: 	CoordTransf: 2
2020-10-14 14:43:28 (191331): Guest Log: 	mass density:  0, cMass: 0
2020-10-14 14:43:28 (191331): Guest Log: 	End 1 Forces (P V M): 1151.99 155.983 15200.9
2020-10-14 14:43:28 (191331): Guest Log: 	End 2 Forces (P V M): -1151.99 -155.983 10068.3
2020-10-14 14:43:28 (191331): Guest Log: ElasticBeam2d: 7
2020-10-14 14:43:28 (191331): Guest Log: 	Connected Nodes: 3 7 
2020-10-14 14:43:28 (191331): Guest Log: 	CoordTransf: 2
2020-10-14 14:43:28 (191331): Guest Log: 	mass density:  0, cMass: 0
2020-10-14 14:43:28 (191331): Guest Log: 	End 1 Forces (P V M): 1129.67 146.725 14638.1
2020-10-14 14:43:28 (191331): Guest Log: 	End 2 Forces (P V M): -1129.67 -146.725 9131.38
2020-10-14 14:43:28 (191331): Guest Log: ElasticBeam2d: 10
2020-10-14 14:43:28 (191331): Guest Log: 	Connected Nodes: 4 8 
2020-10-14 14:43:28 (191331): Guest Log: 	CoordTransf: 2
2020-10-14 14:43:28 (191331): Guest Log: 	mass density:  0, cMass: 0
2020-10-14 14:43:28 (191331): Guest Log: 	End 1 Forces (P V M): 656.494 136.088 12620.2
2020-10-14 14:43:28 (191331): Guest Log: 	End 2 Forces (P V M): -656.494 -136.088 9426.02
2020-10-14 14:43:28 (191331): Guest Log: Eigenvalues:
2020-10-14 14:43:28 (191331): Guest Log: T1 = 1.0401120855641899
2020-10-14 14:43:28 (191331): Guest Log: T2 = 0.3526488535190591
2020-10-14 14:43:28 (191331): Guest Log: T3 = 0.19304096242066518
2020-10-14 14:43:28 (191331): Guest Log: T4 = 0.15628822944549764
2020-10-14 14:43:28 (191331): Guest Log: T5 = 0.13080165778115407
2020-10-14 14:43:29 (191331): Guest Log: Postrun commands...
2020-10-14 14:43:29 (191331): Guest Log: boinc_app exited (0)
2020-10-14 14:43:29 (191331): Guest Log: Saving results...
2020-10-14 14:43:29 (191331): Guest Log: EleForces.out
2020-10-14 14:43:29 (191331): Guest Log: data/
2020-10-14 14:43:29 (191331): Guest Log: data/ElasticFrame.tcl
2020-10-14 14:43:29 (191331): Guest Log: data/MomentCurvature.tcl
2020-10-14 14:43:29 (191331): Guest Log: data.tgz
2020-10-14 14:43:29 (191331): Guest Log: eigenvector.out
2020-10-14 14:43:29 (191331): Guest Log: section1.out
2020-10-14 14:43:29 (191331): VM Completion File Detected.
2020-10-14 14:43:29 (191331): Powering off VM.
2020-10-14 14:43:29 (191331): Successfully stopped VM.
2020-10-14 14:43:29 (191331): Deregistering VM. (boinc_fea8e3cd40a1a93a, slot#2)
2020-10-14 14:43:29 (191331): Removing network bandwidth throttle group from VM.
2020-10-14 14:43:29 (191331): Removing storage controller(s) from VM.
2020-10-14 14:43:29 (191331): Removing VM from VirtualBox.
2020-10-14 14:43:29 (191331): Removing virtual ISO 9660 disk from VirtualBox.
14:43:34 (191331): called boinc_finish(0)

</stderr_txt>
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